BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B02LP1|AL425633
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1609 1572 0.0
3x_Contig1551 323 3e-88
>3x_Contig1609
Length = 15966
Score = 1572 bits (793), Expect = 0.0
Identities = 803/805 (99%), Gaps = 1/805 (0%)
Strand = Plus / Minus
Query: 1 gatcagcaaagctaatcaatggtcatttgctgggattcagagaaaattttacgaataccg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 7274 gatcagcaaagctaatcaatggtcaattgctgggattcagagaaaattttacgaataccg 7215
Query: 61 ccag-cgggaacgaacatgctaaaccagataaattactgcacgaataactaaaactaatc 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7214 ccaggcgggaacgaacatgctaaaccagataaattactgcacgaataactaaaactaatc 7155
Query: 120 ggctcacaaggcctgtgtaaatatacactcgagcccatcttttcaagcgtagaacacaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7154 ggctcacaaggcctgtgtaaatatacactcgagcccatcttttcaagcgtagaacacaat 7095
Query: 180 tcccgacaaatactttatttccgaagctttcccatccaaaaattcctttacttgaaggaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7094 tcccgacaaatactttatttccgaagctttcccatccaaaaattcctttacttgaaggaa 7035
Query: 240 gaaaaggcgaaactgacatgttgacataatcttattaaggaagcgatcctgaacgtaatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7034 gaaaaggcgaaactgacatgttgacataatcttattaaggaagcgatcctgaacgtaatg 6975
Query: 300 gagattaaggaacaacatgcggctgctatgttctgagcggtaatttgacacataacagta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6974 gagattaaggaacaacatgcggctgctatgttctgagcggtaatttgacacataacagta 6915
Query: 360 ttgttgggtgcaatcgacaaaccaagttatttcctacaccccggtcttctaaacgatcca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6914 ttgttgggtgcaatcgacaaaccaagttatttcctacaccccggtcttctaaacgatcca 6855
Query: 420 tgtttctgtattaatatgattcacttattgagcttagacagatgtaagaatctcattact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6854 tgtttctgtattaatatgattcacttattgagcttagacagatgtaagaatctcattact 6795
Query: 480 atgtgatatgaagctcagcagcattgaagttgccaatccacataccgtagcaacttttag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6794 atgtgatatgaagctcagcagcattgaagttgccaatccacataccgtagcaacttttag 6735
Query: 540 gcagtctgtaacaaaaaagaaaaataagttgggttacaacaaaggccctcgatctgacat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6734 gcagtctgtaacaaaaaagaaaaataagttgggttacaacaaaggccctcgatctgacat 6675
Query: 600 tcataacagttgaaaatgtctgatttagagaaggaaccttcagtgacggagaaaacaatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6674 tcataacagttgaaaatgtctgatttagagaaggaaccttcagtgacggagaaaacaatc 6615
Query: 660 tcgagattccagacggtggatacggatgggttatcacatttgcattctttttgtacaatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6614 tcgagattccagacggtggatacggatgggttatcacatttgcattctttttgtacaatt 6555
Query: 720 tttgtacctggggtgcaaatgctggttacgctgtataccttgctacatatttgtcccgtg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6554 tttgtacctggggtgcaaatgctggttacgctgtataccttgctacatatttgtcccgtg 6495
Query: 780 atgtctttcctggcggaggcaagct 804
|||||||||||||||||||||||||
Sbjct: 6494 atgtctttcctggcggaggcaagct 6470
>3x_Contig1551
Length = 9073
Score = 323 bits (163), Expect = 3e-88
Identities = 246/271 (90%), Gaps = 2/271 (0%)
Strand = Plus / Minus
Query: 2 atcagcaaagctaatcaatggtcatttgctgggattcagagaaaattttacgaataccgc 61
|||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct: 594 atcagcaaagctaatcaatggtcaattgctgggaatcagagaaaactttacgaataccgc 535
Query: 62 cag-cgggaacgaacatgctaaaccagataaattactgcacgaataactaaaactaatcg 120
||| ||||||| ||| |||||||||||||||| ||||| ||||||||||||||| || ||
Sbjct: 534 caggcgggaacaaacctgctaaaccagataaactactgtacgaataactaaaaccaaccg 475
Query: 121 gctcacaaggcctgtgtaaatatacactcgagcccatcttttcaagcgtagaacacaatt 180
||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 474 gctcacaagacctgtgtaaatatacactcgagcccatcttttctggcgtagaacatcatt 415
Query: 181 cccgacaaatactttatttccgaagctttcccatccaaaaattcc-tttacttgaaggaa 239
|||||||||| |||||||||||||||||| | || |||||| || ||| |||||| |||
Sbjct: 414 cccgacaaatgttttatttccgaagctttctcttcgaaaaatcccatttgcttgaaagaa 355
Query: 240 gaaaaggcgaaactgacatgttgacataatc 270
|||||| ||||||||||||||||||||||||
Sbjct: 354 gaaaagacgaaactgacatgttgacataatc 324
Score = 218 bits (110), Expect = 1e-56
Identities = 238/277 (85%), Gaps = 4/277 (1%)
Strand = Plus / Minus
Query: 309 gaacaacatgcggctgctatgttctgagcggtaatttgacacataacagtattgt--tgg 366
||||||||| |||| |||||||||| |||||||||||||||||||| || |||| |||
Sbjct: 276 gaacaacatacggccgctatgttctcagcggtaatttgacacataatagacttgtgttgg 217
Query: 367 gtgcaatcgacaaaccaagttatttcctacaccccggtcttctaaacgatccatgtttct 426
||||||||||||||||| ||||||| |||||||| |||| ||| ||||||| ||||
Sbjct: 216 gtgcaatcgacaaaccagtatatttccgacaccccgatctttcaaaggatccatacttct 157
Query: 427 gtattaatatgattcacttattgagcttagacagatgtaa-gaatctcattactatgtga 485
||| ||||||||||||| ||||||||||||| | |||| ||||| || || ||||||
Sbjct: 156 atataaatatgattcactcattgagcttagacgaaagtaatgaatcccaacacgatgtga 97
Query: 486 tatgaagctcagcagcattgaagttgccaatccacataccgtagcaacttttaggcagtc 545
||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 96 catgaa-ctcagcagcacagaagttgtcaatccacataccatagcaacttttaggcagtc 38
Query: 546 tgtaacaaaaaagaaaaataagttgggttacaacaaa 582
||||||| |||||| |||||||||| |||||| ||||
Sbjct: 37 tgtaacagaaaagacaaataagttgagttacagcaaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5651
Number of Sequences: 1807
Number of extensions: 5651
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 2
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)